Research & teaching

Research funding

  • 2022 ELIXIR Rare Diseases 2022/23 Implementation Study
  • 2021 EHDEN Data Partner 2021, for ERKReg Rare Disease Patient Registry

Research supervised

Supervision at LUMC
PhD advisor

2020-present Co-supervised PhD in Biomedicine 2020-present on “Conceptual goal modelling for FAIRification”, Mr César H. Bernabé, Primary mentors: Dr. Annika Jacobsen and Dr. Marco Roos, Leiden UMC (NL).

MSc advisor
  • 2020-present Co-supervised MSc in Bioinformatics Expected graduation 2022 on “Huntington disease structured review for hypothesis generation”, Mr Karolis Cremers, Primary mentors: Dr. Katy Wolstencroft, Dr. Eleni Mina and Dr. Núria Queralt Rosinach, Leiden Institute of Advanced Computer Science and Leiden UMC (NL).
Graduated
  • 2021-2022 Supervised MSc in Bioinformatics 2022 Thesis on “Knowledge graphs and explainable AI for Duchenne Muscular Dystrophy drug repurposing”, Mr Pablo Perdomo Quinteiro, Primary mentors: Dr. Katy Wolstencroft and Dr. Núria Queralt Rosinach, Leiden Institute of Advanced Computer Science and Leiden UMC (NL).
  • 2021-2022 Co-supervised MSc in Bioinformatics 2022 Thesis on “Automated drug repurposing workflow for rare diseases”, Ms Carmen Reep, Primary mentors: Dr. Katy Wolstencroft, Dr. Eleni Mina and Dr. Núria Queralt Rosinach, Leiden Institute of Advanced Computer Science and Leiden UMC (NL).
  • 2020-2021 Co-supervised MSc in Data Science 2021 Thesis on “Federated Learning on personal health data”, Mr Casper van Aarle, Primary mentors: Prof. Dr. Ir. Djoerd Hiemstra and Prof. Dr. Peter-Bram A.C. ‘t Hoen, Radboud University (NL).
Supervision at Scripps Research

Summer 2016 Co-supervised STSI Summer Student Research Internship 2016 project on “Drug repurposing”, Ms Siyue Wu, Primary mentors: Prof. Dr. Andrew Su and Dr. Benjamin Good, Scripps Research (US).

Teaching

Open University of Catalonia (UOC)
  • 2010- 2016 Bioinformatics final project (MSc in Bioinformatics)
Rovira i Virgili University (URV)
  • 2002-2005 FORTRAN 77 programming language (BSc Chemistry)
  • 2001-2006 Chemical-Physics wet lab (BSc Chemistry)
Advertisement